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The genome of the cucumber, Cucumis sativus L.
Huang, Sanwen1; Li, Ruiqiang2,3; Zhang, Zhonghua1; Li, Li2; Gu, Xingfang1; Fan, Wei2; Lucas, William J.4; Wang, Xiaowu1; Xie, Bingyan1; Ni, Peixiang2; Ren, Yuanyuan2; Zhu, Hongmei2; Li, Jun2; Lin, Kui5; Jin, Weiwei6; Fei, Zhangjun7,8; Li, Guangcun9; Staub, Jack10; Kilian, Andrzej11; van der Vossen, Edwin A. G.12; Wu, Yang5; Guo, Jie5; He, Jun1; Jia, Zhiqi1; Ren, Yi1; Tian, Geng2; Lu, Yao2; Ruan, Jue2,13; Qian, Wubin2; Wang, Mingwei2; Huang, Quanfei2; Li, Bo2; Xuan, Zhaoling2; Cao, Jianjun2; Asan2; Wu, Zhigang2; Zhang, Juanbin2; Cai, Qingle2; Bai, Yinqi2; Zhao, Bowen14; Han, Yonghua6; Li, Ying1; Li, Xuefeng1; Wang, Shenhao1; Shi, Qiuxiang1; Liu, Shiqiang1; Cho, Won Kyong15,16; Kim, Jae-Yean15,16; Xu, Yong17; Heller-Uszynska, Katarzyna11; Miao, Han1; Cheng, Zhouchao1; Zhang, Shengping1; Wu, Jian1; Yang, Yuhong1; Kang, Houxiang1; Li, Man1; Liang, Huiqing2; Ren, Xiaoli2; Shi, Zhongbin2; Wen, Ming2; Jian, Min2; Yang, Hailong2; Zhang, Guojie2,13; Yang, Zhentao2; Chen, Rui2; Liu, Shifang2; Li, Jianwen2; Ma, Lijia2,13; Liu, Hui2; Zhou, Yan2; Zhao, Jing2; Fang, Xiaodong2; Li, Guoqing2; Fang, Lin2; Li, Yingrui2,13; Liu, Dongyuan2; Zheng, Hongkun2,3; Zhang, Yong2; Qin, Nan2; Li, Zhuo2; Yang, Guohua2; Yang, Shuang2; Bolund, Lars2,18; Kristiansen, Karsten19; Zheng, Hancheng2,20; Li, Shaochuan2,20; Zhang, Xiuqing2; Yang, Huanming2; Wang, Jian2; Sun, Rifei1; Zhang, Baoxi1; Jiang, Shuzhi1; Wang, Jun2,19; Du, Yongchen1; Li, Songgang2
2009
发表期刊NATURE GENETICS
ISSN1061-4036
卷号41期号:12页码:1275-U29
摘要Cucumber is an economically important crop as well as a model system for sex determination studies and plant vascular biology. Here we report the draft genome sequence of Cucumis sativus var. sativus L., assembled using a novel combination of traditional Sanger and next-generation Illumina GA sequencing technologies to obtain 72.2-fold genome coverage. The absence of recent whole-genome duplication, along with the presence of few tandem duplications, explains the small number of genes in the cucumber. Our study establishes that five of the cucumber's seven chromosomes arose from fusions of ten ancestral chromosomes after divergence from Cucumis melo. The sequenced cucumber genome affords insight into traits such as its sex expression, disease resistance, biosynthesis of cucurbitacin and 'fresh green' odor. We also identify 686 gene clusters related to phloem function. The cucumber genome provides a valuable resource for developing elite cultivars and for studying the evolution and function of the plant vascular system.
学科领域Genetics & Heredity ; Genetics & Heredity
DOI10.1038/ng.475
收录类别SCI
语种英语
WOS记录号WOS:000272144900007
出版者NATURE PUBLISHING GROUP
nyguid5121a803-d3a6-4d83-b52a-ccefec6ff243
引用统计
被引频次:669[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.nais.net.cn/handle/2HMLN22E/149296
专题蔬菜花卉研究所_生物技术研究室
植物保护研究所_职能部门
蔬菜花卉研究所_职能部门
蔬菜花卉研究所_植物保护研究室
蔬菜花卉研究所_葫芦科研究室
作者单位1.Chinese Acad Agr Sci, Inst Vegetables & Flowers, Sino Dutch Joint Lab Hort Genom Technol, Minist Agr,Key Lab Hort Crops Genet Improvement, Beijing, Peoples R China;
2.BGI Shenzhen, Shenzhen, Peoples R China;
3.Univ So Denmark, Dept Biochem & Mol Biol, Odense, Denmark;
4.Univ Calif Davis, Coll Biol Sci, Dept Plant Biol, Davis, CA 95616 USA;
5.Beijing Normal Univ, Coll Life Sci, Beijing, Peoples R China;
6.China Agr Univ, Beijing Key Lab Crop Genet Improvement, Key Lab Crop Genet Improvement & Genome, Natl Maize Improvement Ctr China,Minist Agr, Beijing 100094, Peoples R China;
7.Cornell Univ, Boyce Thompson Inst Plant Res, Ithaca, NY 14853 USA;
8.Cornell Univ, USDA, Robert W Holley Ctr Agr & Hlth, Ithaca, NY USA;
9.Shandong Acad Agr Sci, High Tech Res Ctr, Jinan, Peoples R China;
10.Univ Wisconsin, Dept Hort, USDA ARS, Vegetable Crops Res Unit, Madison, WI 53706 USA;
11.Divers Arrays Technol, Canberra, ACT, Australia;
12.Wageningen UR Plant Breeding, Wageningen, Netherlands;
13.Chinese Acad Sci, Grad Univ, Beijing, Peoples R China;
14.Renmin Univ China, High Sch, Beijing, Peoples R China;
15.Gyeongsang Natl Univ, Div Appl Life Sci, BK21 & WCU Program, PMBBRC, Jinju, South Korea;
16.Gyeongsang Natl Univ, EB NCRC, Jinju, South Korea;
17.Natl Engn Res Ctr Vegetables, Beijing, Peoples R China;
18.Univ Aarhus, Inst Human Genet, Aarhus, Denmark;
19.Univ Copenhagen, Dept Biol, Copenhagen, Denmark;
20.S China Univ Technol, Guangzhou, Guangdong, Peoples R China
第一作者单位蔬菜花卉研究所
推荐引用方式
GB/T 7714
Huang, Sanwen,Li, Ruiqiang,Zhang, Zhonghua,et al. The genome of the cucumber, Cucumis sativus L.[J]. NATURE GENETICS,2009,41(12):1275-U29.
APA Huang, Sanwen.,Li, Ruiqiang.,Zhang, Zhonghua.,Li, Li.,Gu, Xingfang.,...&Li, Songgang.(2009).The genome of the cucumber, Cucumis sativus L..NATURE GENETICS,41(12),1275-U29.
MLA Huang, Sanwen,et al."The genome of the cucumber, Cucumis sativus L.".NATURE GENETICS 41.12(2009):1275-U29.
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